Pad printing machine controller is provided with main features like: it can operate in two different modes, Manual Operate and Shuttle Operate mode. In Manual Operate mode, 8 different operations it can handle like Single Cycle Single Stroke, Single Cycle Double Stroke, Continuous Cycle Single Stroke, Continuous Cycle Double Stroke, Doctor Blade At Rear etc. and In Shuttle Operate mode we can get four different operations related to color print like Single, Double, Three and Four Color Print. In case machine is idle for more than 3 minutes, it will perform Auto Doctoring in this mode. Machine is capable of providing 16 Relay outputs and capable of taking 16 proxy inputs and One High Frequency input. These dynamic features make the operation more reliable and easy. Other unique features in it are non-volatile memory for storing counts, Pad stroke adjustment at plate, at object and speed count. It has also simple maintenance, low cost, proven design etc. It has excellent facility for setting time required by the operator.